Scientist, Analytical Chemistry

Alios BioPharma, Inc. is a biotechnology company located in San Francisco, California that is developing novel medicines that treat diseases in virology by activating pathways in the innate immune system. Alios is pursuing the development of both protein and small molecule therapeutics, each addressing major commercial market opportunities.

Alios is discovering and developing novel antiviral agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrugs, and glycoprotein-engineering of interferons (Glycoferon). This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS).

At Alios, our science is the key to our success, and to improving patients' quality of life. Our pipeline of developing novel compounds and investigative therapies reflects our commitment to bring innovative products to patients with unmet needs in the areas of virology.

Responsibilities

Scientist, Analytical Chemistry

The position will provide analytical and purification supports to our medicinal chemistry efforts. Responsibilities include maintaining LC-MS and HPLC, analyzing chemical and biochemical materials, and conducting preparative HPLC purification. Responsibility may also include operation and maintenance of NMR, based on candidate’s previous experience. The incumbent will provide a technical leadership in analytical chemistry.

Requirements

Ph.D. in analytical chemistry or organic chemistry with 2+ years of postdoctoral experience, or MS in chemistry with 5+ years of experience in industrial setting.

Prior experience in operating and maintaining HPLC and LC-MS is required.

Experience in analysis and purification of nucleotides is preferred, but not required.

Experience in maintaining NMR is a plus.

The incumbent is expected to be detail-oriented and capable of handling multiple tasks in the area of analytical chemistry and purification.

 

Alios: Associate Director/Director, Assay Development, Biochemistry
Associate Director/Director, Assay Development, Biochemistry

Alios BioPharma, Inc. is a biotechnology company located in San Francisco, California that is developing novel medicines that treat diseases in virology by activating pathways in the innate immune system. Alios is pursuing the development of both protein and small molecule therapeutics, each addressing major commercial market opportunities.

Alios is discovering and developing novel antiviral agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrugs, and glycoprotein-engineering of interferons (Glycoferon). This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS).

At Alios, our science is the key to our success, and to improving patients' quality of life. Our pipeline of developing novel compounds and investigative therapies reflects our commitment to bring innovative products to patients with unmet needs in the areas of virology.

Responsibilities

Associate Director/Director, Assay Development Biochemistry

Lead Assay development and mechanistic Biochemistry efforts in several programs while staying active in the laboratory.

Manage external biochemistry projects at contract research organization(s).

Requirements

Ph.D. in relevant scientific discipline

10+ years of biochemical assays development with applications for drug discovery in the pharmaceutical/biotech industry.

Strong knowledge of enzyme kinetics and hands –on expertise in development of mechanism of action based inhibitors.

Demonstrated expertise in the field of structure based drug design as applied to viral polymerases is a strong plus.

Strong record of patent applications and scientific publications.

Self-starter, powerful innovator and energetic, personable scientist who is able to work collaboratively across different functional areas.

 

Alios: Phosphate Protected Nucleotide Prodrugs
Phosphate Protected Nucleotide Prodrugs

Nucleosides work by mimicking cellular nucleotides (the building blocks of RNA and DNA) and inhibit RNA or DNA synthesis.  A nucleoside is unphosphorylated and must rely on cellular enzymes to attach phosphate groups to create active nucleotide compounds.  Nucleoside drugs often cannot be given in combination since the two drugs in the combination would both need to be phosphorylated inside cells and thus compete for the same enzymes.  Alios scientists, working in collaboration with the world renowned nucleotide chemist Harry Lundberg, Ph.D. at the University of Turku, have synthesized phosphate protected nucleotide prodrugs, and have demonstrated that cellular enzymes can metabolize the protected prodrugs into authentic nucleotide-monophosphate analogs.

The first of these drug candidates is a phosphate protected nucleotide prodrug directed against HCV. Utilizing the Alios proprietary phosphate protected nucleotide prodrug chemistry, the company is advancing clinical candidate compounds that have the potential to be given a substantially lower doses compared to the nucleosides used thus far and may therefore avoid or diminish the related toxicities previously seen.

Alios: Administrative Assistant & Office Manager
Administrative Assistant & Office Manager

THIS POSITION HAS BEEN FILLED

Alios BioPharma, Inc. is a biotechnology company located in San Francisco, California that is developing novel medicines that treat diseases in virology by activating pathways in the innate immune system. Alios is pursuing the development of both protein and small molecule therapeutics, each addressing major commercial market opportunities.

Alios is discovering and developing novel antiviral agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrugs, and glycoprotein-engineering of interferons (Glycoferon). This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS).

At Alios, our science is the key to our success, and to improving patients' quality of life. Our pipeline of developing novel compounds and investigative therapies reflects our commitment to bring innovative products to patients with unmet needs in the areas of virology.

The Position
This position will provide main receptionist and corporate administrative support to staff members.  The successful candidate must possess excellent communication skills, both verbal and written, be proactive, quick learner and excel as a team player.

Responsibilities:

• Effectively use Microsoft Outlook to manage calendars, resolve conflicts, cancellations and calendar follow up as needed
• Anticipate and prepare necessary materials to enable successful meetings, appointments, conferences and phone calls
• Coordinate and book travel and offsite meetings along with all other required arrangements for the success of the event
• Contact external business partners as requested for information, scheduling meetings or miscellaneous follow up; professional phone presence required
• Perform general clerical duties to include but not limited to: filing, copying, scanning, faxing, mailing, FedExing and ordering of laboratory and office supplies
• Answer incoming calls from company’s main phone line and direct callers as appropriate; professional phone presence required; notify employees of guest arrivals; escort visitors to appropriate senior staff members
• Create and modify documents primarily in Microsoft Word, Excel and PowerPoint
• Establish and maintain effective hardcopy and electronic document filing/management system
• Prepare expense reimbursements, check requests and reconcile credit card receipts to billing statements
• Place food orders for occasional lunch meetings; room prep before and tidying up after
• Prepare, compile, deliver, track and file regular reports
• Other duties as assigned

Qualifications and Requirements:

• 3+ years of progressive experience as an Administrative Assistant in a fast paced corporate setting (interest in science is a plus)
• Top notch Microsoft Outlook capabilities; Strong working knowledge of Microsoft Word, Excel and PowerPoint
• Excellent written and verbal communication skills, interpersonal and team player capabilities
• Demonstrated ability to be proactive, use independent judgment, discretion and maintain confidentiality
• Effective multitasking, attention to detail and strong organizational skills
• Strong computer and internet searching capabilities
• Comfortable interacting with all levels of the organization


Alios: Scientist I/II, Nucleoside Chemistry
Scientist I/II, Nucleoside Chemistry

Scientist I/II, Nucleoside Chemistry

Alios BioPharma, Inc. is a biotechnology company located in San Francisco, California that is developing novel medicines that treat diseases in virology by activating pathways in the innate immune system. Alios is pursuing the development of both protein and small molecule therapeutics, each addressing major commercial market opportunities.

Alios is discovering and developing novel antiviral agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrugs, and glycoprotein-engineering of interferons (Glycoferon). This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS).

At Alios, our science is the key to our success, and to improving patients' quality of life. Our pipeline of developing novel compounds and investigative therapies reflects our commitment to bring innovative products to patients with unmet needs in the areas of virology.

Responsibilities:  

This is a hands-on, nucleoside specific synthetic chemistry position. The person at this position is expected to independently conduct synthesis of new chemical entities, including design of efficient synthetic routes and chemical structure assignments by NMR and MS spectra.

ONLY candidates with experience in synthesis of  nucleosides and nucleotides will be considered.

Requirements:  

Ph.D. in synthetic organic or medicinal chemistry with 2+ years of experience in synthesis of nucleosides and nucleotides.  

Strong publications record (including patents) and demonstrated ability solving challenging synthetic problems

Application Process

Please send a cover letter and resume to .  When you respond, please type “Scientist I/II, Nucleoside Chemistry” in the SUBJECT box  

Please no recruiters and no calls.

Alios: Technology
Technology

Alios is discovering and developing novel therapeutic agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrug chemistry, and glycoprotein-engineering of interferons (Glycoferonâ).   This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, and respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS). 

Traditional approaches to antiviral therapy have utilized agents that directly inhibit viral encoded enzymes. Although quite successful, traditional direct antiviral approaches have significant challenges.  Since the direct antiviral therapeutic approaches target viral encoded proteins, these medicines have a limited spectrum of activity and are often only effective against one type of virus. The second challenge is the emergence of drug resistance.  In most cases, monotherapy of any direct antiviral agent will lead to drug resistance.  This is the reason that antiviral agents of different mechanisms are combined.  Finally, in order to use a direct antiviral agent, a clear diagnosis of the infecting virus must be made and thus emergent viruses are often difficult to treat until direct antiviral agents can be produced.  This can take years to accomplish.

Alios is taking a novel approach to virology by utilizing activation of a component of the host innate immune system (RNase L) to create broad-spectrum antiviral agents. The Alios small molecule activators of innate immunity work by binding to an enzyme called RNase L.  RNase L is present in most human cells and is naturally activated during viral infections following cellular stimulation by a protein hormone called interferon. Once activated, RNase L goes on to destroy viral RNA genomes and thus blocks the virus from reproducing.  

In the second platform program, Alios scientists have discovered a way to create improved versions of existing antiviral agents called nucleosides. Nucleosides work by mimicking cellular nucleotides (the building blocks of RNA and DNA) and inhibit RNA or DNA synthesis.  A nucleoside is unphosphorylated and must rely on cellular enzymes to attach phosphate groups in order to create active nucleotide compounds. Alios scientists, working in collaboration with the world renowned nucleotide chemist Dr. Harry Lundberg, Ph.D. at the University of Turku, have synthesized phosphate protected nucleotide prodrugs, and have demonstrated that cellular enzymes can metabolize the protected prodrugs into authentic nucleotide-monophosphate analogs.

Alios: Overview
Overview


Alios: Hyperglycosylated Type I Interferons
Hyperglycosylated Type I Interferons

Coming Soon
Alios: Activators of innate immunity
Activators of innate immunity

RNase L is a protein that is activated by a chemical called 2’-5’ oligo A.  This chemical is synthesized by cells after stimulated with a protein hormone called Interferon following a viral infection and comprises a major component of the innate antiviral response.  Once activated by 2’-5’ oligo A, the RNase L protein, in turn destroys viral RNA genomes, which results in a blockade of viral replication.  In addition, the byproducts of the degradation of viral RNA stimulate the production of local Interferon, thus amplifying the antiviral pathways of the innate immune system.

Alios and The Cleveland Clinic have entered into an exclusive collaboration to discover and develop certain RNase L activation technology developed by Cleveland Clinic scientist, Robert Silverman, Ph.D., a leading expert on the RNase L system.  Under the collaboration, Alios has exclusively licensed worldwide rights to a broad array of issued target patents encompassing RNase L as well as patent applications for small molecule activators of the enzyme.  Alios is also funding specific research projects in Dr. Silverman’s laboratory.  Several of the Alios compounds have demonstrated antiviral activity in cell-based models of viral infection for both RNA and DNA viruses with no cytoxicity over a range of doses with antiviral effects.  The Alios lead small molecule activators of RNase L will target Hepatitis C virus as the first indication.

Alios: Contact Info
Contact Info

 

Permanent Mailing Address:

Alios BioPharma, Inc.
101 A Hickey Boulevard, Suite 511
South San Francisco, CA  94080

Business Address:

Alios BioPharma, Inc.
260 East Grand Ave, 2nd Floor
South San Francisco, CA 94080

(650) 635-5500 (Main Telephone Number)

(650) 872-0584 (Fax Number)

For investor and media inquiries email
For Human Resources inquiries email                                                                                                                                                                                                                                                                    For Business Development inquiries email  

Alios: Career Opportunities
Career Opportunities

Alios is currently not hiring. Check back with us!

Alios: Scientific Publications
Scientific Publications

Alios: Press Releases
Press Releases

Alios BioPharma, Inc. Completes First Closing of Series A Financing with Commitment of $24 MM from 3 Top-Tier Investors

 

South San Francisco, CA  – February 12, 2009 –  Alios BioPharma, Inc. announced today that it has concluded the first closing of its Series A preferred stock financing with a commitment from new investors of $24 million. The first tranche of $8.4 million has been completed, led by Novo Ventures and Novartis Ventures with participation from the Roche Venture Fund.  Jack B. Nielsen, Novo Ventures, will serve as its Chairman of the Board.  Also joining current members Raymond F. Schinazi, Ph.D., D.Sc. and Lawrence M. Blatt, Ph.D. on the Alios Board of Directors is Campbell Murray, M.D., Novartis Ventures and Carole Nuechterlein, Roche Venture Fund. will sit as an observer.

      “We look forward to working closely with our new investors and members of the Board of Directors to build our company and successfully develop our pipeline," said Lawrence M. Blatt, Ph.D., Founder and Chief Executive Officer of Alios. “Several viral diseases remain difficult to treat and represent areas of significant unmet medical need.  We view the Alios product candidates as a complementary approach to existing antiviral therapies where the complexity of these diseases requires treatment with multiple agents with differing mechanisms of actions.”

About Alios BioPharma

Alios BioPharma, Inc., an emerging biotechnology company headquartered in South San Francisco, California, is developing novel medicines to treat diseases in virology by activating pathways in the innate immune system. Alios is pursuing the development of small-molecule and protein therapeutics, each addressing major commercial market opportunities. 

  end – 

 

CONTACTS: 

Alios BioPharma

Bruce Bryan, MBA (corporate)

Senior Director of Operations

press@aliosbiopharma.com

 

Debra Bannister (media)

530 676-8001

Alios: Scientific Advisory Board
Scientific Advisory Board

Ernest Borden, M.D.
• Cleveland Clinic Foundation
• Practicing Oncologist with >20 years research and clinical trials experience with immunomodulatory therapy in cancer

Eleanor Fish, Ph.D.
• University of Toronto
• Immunologist, infectious diseases specialist and expert in activation of immune effector cells such as NK cells

Michael Gale, Ph.D.
• University of Southwest Texas
• Virologist and expert on viral host interactions as they relate to innate and adaptive immunity

Raymond Kaempfer, Ph.D.
• Hebrew University
• Immunologist and bio-defense expert with large basic science effort aimed at modulation of innate immunity

Robert Silverman, Ph.D.
• Cleveland Clinic Foundation
• Immunologist and expert in Interferon signaling cascade and discoverer of RNase L pathway

Bryan Williams, Ph.D.
• Monash University
• Immunologist and expert in Interferon signaling cascade and Toll-like receptor pathways

Alios: Board of Directors
Board of Directors

Lawrence Blatt, Ph.D., MBA –  President & CEO
See Management Bio

 

Jack Nielsen – Chairman of the Board
Jack Nielsen, Partner, joined Novo A/S in 2001 and is located in San Francisco, CA.

From 1990 to 2001 Mr. Nielsen held various positions in the Novo Nordisk business area which in 2000 became Novozymes A/S. Before joining Novo Ventures, Mr. Nielsen was for four years deeply involved in designing the R&D strategy for Novozymes’ activities in the cereal food area, resulting in the development and launch of novel recombinant lipase and amylase enzymes. Jack has furthermore been involved in collaborations with Procter & Gamble, Danisco, and Quest International to identify new enzymes for the detergent and cereal food industry. Prior hereto, he held positions in marketing and technical services in the textile and personal care area, and started his career in the field of large-scale manufacturing of enzymes.
Mr. Nielsen serves on the board of directors of Cell Biosciences, Inc., MediQuest Therapeutics, Inc., Protein Forest, Inc., Reata Pharmaceuticals, Inc. and NeoMend, Inc., and he is a former director of Panacos Pharmaceuticals, Inc., Nuevolution A/S, and CardioOptics, Inc.
Jack Nielsen obtained his MSc in 1990 from the Technical University of Denmark, and his Master in Management of Technology from the Center for Technology, Economics and Management in Copenhagen in 2000.

Dr. Campbell Murray, MD. – Board Member
Dr. Murray is a Managing Director of the Novartis Venture Funds in Cambridge, MA, USA.

Prior to joining the venture fund in 2005, he worked at the Novartis Institutes for BioMedical Research as the director of special projects reporting to the president & CEO. Campbell, is a trained physician, Kauffman Fellow and holds an MBA with distinction from Harvard Business School and an MPP (public policy) from the John F. Kennedy School of Government where he was a Knox Fellow and Rotary Ambassadorial Scholar. Dr Murray serves as a director on the boards of Aileron Therapeutics, Akebia Therapeutics, BioRelix, and ProCertus BioPharm and as an observer on the board of MicroCHIPS and Tepha.


Kent Gossett, DVM, Ph.D. - Board Member                                                                                                                                                                                                                              Dr. Gossett is a Partner of SR One in Conshohocken, PA, USA.

Kent joined SR One in 2003. He is a member of the Board of Directors of CalciMedica and Locus Pharmaceuticals and an Observer for Scynexis Pharmaceuticals. He was previously Director of Protez Pharmaceuticals, Algeta ASA, and Alere Medical and Observer for Morphotek.  Kent has 20 years experience in the pharmaceutical industry in safety assessment, drug development, business development and venture capital. Kent received his DVM and MS from Purdue University, his PhD in Veterinary Clinical Pathology from Louisiana State University, and his MBA from the Wharton School of the University of Pennsylvania.

 

Peter Hirth, Ph.D. – Board Member

Dr. Hirth co-founded Plexxikon in December 2000, and has 20 years of biotechnology and pharmaceutical discovery and development experience. Previously, he was president of Sugen, Inc. until the sale of the company to Pharmacia Corporation in 1999. At Sugen, he helped build the company from its inception and advanced several kinase inhibitors through clinical trials for the treatment of oncology. Prior to Sugen, Dr. Hirth was a vice president in research with Boehringer Mannheim where, among other responsibilities, he successfully led the company's erythropoietin program. Previously, he also was a research scientist with the Max Planck Institute, following the completion of his post doctoral work at the University of California, San Diego. Dr. Hirth received his Ph.D. in molecular genetics from Heidelberg University, Germany.

 

Alios: Management Team
Management Team

Lawrence Blatt, Ph.D., MBA – President & CEO
• 23 years of industrial scientific and drug development experience
• Amgen Inc., National Genetics Institute, Ribozyme Pharmaceuticals and InterMune

Leonid Beigelman, Ph.D. – VP Medicinal Chemistry
• 20 years experience in medicinal chemistry with specific expertise in nucleotide and nucleoside chemistry.  Expert at medicinal chemical structure informed library generation

Alios: Overview
Overview

Alios is discovering and developing novel therapeutic agents based on three platform technologies including: small molecule activators of innate immunity antiviral pathways (RNase L activation), phosphate protected nucleotide prodrug chemistry, and glycoprotein-engineering of interferons (Glycoferonâ).   This complementary group of platform technologies has the potential to generate a number of distinct therapeutic products to treat a variety of serious viral infections such as chronic hepatitis B and C, HIV infection, and respiratory viruses (e.g. pandemic influenza) and emerging viral diseases (e.g. SARS).

 

Traditional approaches to antiviral therapy have utilized agents that directly inhibit viral encoded enzymes. Although quite successful, traditional direct antiviral approaches have significant challenges.  Since the direct antiviral therapeutic approaches target viral encoded proteins, these medicines have a limited spectrum of activity and are often only effective against one type of virus. The second challenge is the emergence of drug resistance.  In most cases, monotherapy of any direct antiviral agent will lead to drug resistance.  This is the reason that antiviral agents of different mechanisms are combined.  Finally, in order to use a direct antiviral agent, a clear diagnosis of the infecting virus must be made and thus emergent viruses are often difficult to treat until direct antiviral agents can be produced.  This can take years to accomplish.

Alios is taking a novel approach to virology by utilizing activation of a component of the host innate immune system (RNase L) to create broad-spectrum antiviral agents. The Alios small molecule activators of innate immunity work by binding to an enzyme called RNase L.  RNase L is present in most human cells and is naturally activated during viral infections following cellular stimulation by a protein hormone called interferon. Once activated, RNase L goes on to destroy viral RNA genomes and thus blocks the virus from reproducing.   

In the second platform program, Alios scientists have discovered a way to create improved versions of existing antiviral agents called nucleosides. Nucleosides work by mimicking cellular nucleotides (the building blocks of RNA and DNA) and inhibit RNA or DNA synthesis.  A nucleoside is unphosphorylated and must rely on cellular enzymes to attach phosphate groups in order to create active nucleotide compounds. Alios scientists, working in collaboration with the world renowned nucleotide chemist Dr. Harry Lundberg, Ph.D. at the University of Turku, have synthesized phosphate protected nucleotide prodrugs, and have demonstrated that cellular enzymes can metabolize the protected prodrugs into authentic nucleotide-monophosphate analogs.

Alios: Home
Home

Alios BioPharma, Inc. is a biotechnology company located in South San Francisco, California that is developing novel medicines that treat diseases in virology by activating pathways in the innate immune system.   Alios is pursuing the development of both protein and small molecule therapeutics, each addressing major commercial market opportunities.